Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817799.1_cds_XP_016499324.1_13258
CDS Infomation

[gene=LOC107817941] [db_xref=GeneID:107817941] [protein=BTB/POZ domain-containing protein At5g48800-like] [protein_id=XP_016499324.1] [location=complement(join(17521..18042,18838..19980,20460..20526,21240..21304))] [gbkey=CDS]
Sequence

ATGGACAAGCACCACCATCAACTACCTCTAACCAAGTCTACTTCGCGCCAGCGTTATAAC
GAATGGGTATTTCGAGATGTTCCTAGTGATATAACAATAGAAGTGGATGGTGGCATATTT
TCACTCCACAAGTTTCCCCTTGTTTCGAGAAGCGGACGAATCCGGAGGCTAGTAGCAGAG
CACAGAGATTCTGATATATCAAGAATTGAGCTTGTTAGTTTACCAGGTGGAACAGAATCA
TTCGAGCTAGCAGCCAAATTCTGTTATGGTGTCAACTTTGAGATCACAGCAGCAAATGTT
GCTCAGCTTTGTTGCGTATCCGATTATCTCGAGATGTCAGAGGACTACTCGAAAAACAAT
CTCGGTTCAAGAGCTGAAGAATATCTTGACAGCATTGTTTGCAAGAATCTTGAAATGTGT
GTTGAAGTCTTGAGACAATGTGAAAACTTACTTCCACTTGCTGATGAGCTGAAAGTTGTT
AGCCGGTGTATCGATGCTGTAGCATCGAAAGCTTGTGTCGAGCAAATCGCCTCAAGTTTC
TCGCGATTGGAGTATAGTATCTCAGGTGGAAGACTACATATGAGTAAACAAGCCAATTGC
GAATTGGACTGGTGGATTGAGGATATTTCAATGCTTCGTATCGACTTGTACCAACGTGTC
ATAACCGCGATGAAGTTTCGTGGGGTTAGGCCTGAGAGTATTGCTGCATCACTAGTGAAC
TATGCACAGAAGGAATTGATACAAAAGACCCTTTCTGGTTCAAATATCCAAGAAAAACTA
GTGGTTGAGACGATCGTGAGCCTGATGCCAGTTGAAAAATTCGTCGTGCCCTTGACCTTT
CTTTTTGGATTGTTGCGAAGTGCAGTGATGTTAGATTGCACGGTTGCTTGTAGGCTTGAT
CTCGAGAGGCGGATAGGATCTCAATTGGATACGGCTACCCTGGACGATATACTGATTCCT
TCCTTTCGACATGCTGGTGATACATTGTTTGATGTTGACACAGTGCATCGAATATTGGTT
AACTTTTCACAGCAAGAGGGCGATAGCGATGATGATATGGAAGATGTATCGGTTTTTGAA
TCCGATAGCCCTACTACGACGCCATCACAAACTGCATTGTTCAAAGTATCAAAGTTGGTT
GACAATTACCTAGCTGAAATTGCACTAGATGCAAATCTAAAGCTGAACAAGTTCATTGCT
GTTGCAGAAACATTACCAGCACATGCGCGTACTGTCCACGATGGACTTTATCGAGCAATC
GACCTTTACCTCAAGGCTCATCAAACTTTATCAGATCCAGACAAGAGGAGACTATGCAAA
TTGATTGATTTCCAAAAGCTCTCACAGGAAGCTGGTGCACAGGCTGCACAAAATGAGCGC
CTTCCCCTCCAATCAATCGTTCAAGTTCTTTATTTCGAGCAATTGAGGCTACGAAACGCC
TTGTTTTGTTCGTACCCTGATGATGACATTAAGCCAACGCACCAGTCTTGGAGGATCAAT
AGTGGTGCTCTTAGTGCTGCAATGTCTCCCAAGGACAATTATGCTTCGTTGAGACGAGAA
AATAGAGAGCTAAAACTTGAACTAGCGCGGATGAGGATGAGATTAAATGACCTGGAAAAA
GATCATGTTTGTATGAAGAGGAATATGCAAAAATCTAGCTCGAGACGATTCATGAAATCC
TTCTCCAAAAGGATTGGCAAAAAGTTCAATATTTTCGGACATAATTTTTCCAGGGATTGT
AGTTCTCCCTCAAGTCAGTCAGAAAGAACTGAATCTAAAATAACTGAAAGAACTTGA

Peptide Sequence

PEP ID

XP_016499324.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Nicotiana tabacum]
Sequence

MDKHHHQLPLTKSTSRQRYNEWVFRDVPSDITIEVDGGIFSLHKFPLVSRSGRIRRLVAE
HRDSDISRIELVSLPGGTESFELAAKFCYGVNFEITAANVAQLCCVSDYLEMSEDYSKNN
LGSRAEEYLDSIVCKNLEMCVEVLRQCENLLPLADELKVVSRCIDAVASKACVEQIASSF
SRLEYSISGGRLHMSKQANCELDWWIEDISMLRIDLYQRVITAMKFRGVRPESIAASLVN
YAQKELIQKTLSGSNIQEKLVVETIVSLMPVEKFVVPLTFLFGLLRSAVMLDCTVACRLD
LERRIGSQLDTATLDDILIPSFRHAGDTLFDVDTVHRILVNFSQQEGDSDDDMEDVSVFE
SDSPTTTPSQTALFKVSKLVDNYLAEIALDANLKLNKFIAVAETLPAHARTVHDGLYRAI
DLYLKAHQTLSDPDKRRLCKLIDFQKLSQEAGAQAAQNERLPLQSIVQVLYFEQLRLRNA
LFCSYPDDDIKPTHQSWRINSGALSAAMSPKDNYASLRRENRELKLELARMRMRLNDLEK
DHVCMKRNMQKSSSRRFMKSFSKRIGKKFNIFGHNFSRDCSSPSSQSERTESKITERT

Transcript Sequence

Gene sequence data has not been registered.